PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019175354.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 538aa    MW: 60618.6 Da    PI: 4.6973
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019175354.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM143.31.3e-44191562128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     ppGfrF+Ptdeelvv+yLk+k+ ++++   +vi e+d+yk eP++Lp  +k+k+++++w+fFs+rd+ky++g r+nratk+g+Wk tg+d+ +++
  XP_019175354.1  19 PPGFRFQPTDEELVVYYLKRKICRQPIMR-DVIGETDVYKREPEELPelSKLKTGDRQWFFFSPRDRKYPNGARSNRATKQGFWKVTGRDRIITC 112
                     9*************************988.99**************95449999***************************************** PP

             NAM  95 kkgelvglkktLvfykgrapkge...........ktdWvmheyrl 128
                      ++++vg+kktLvfykgr+p+ +           +tdWvm ey++
  XP_019175354.1 113 -NSRNVGVKKTLVFYKGRTPTIKpsspkptikpeRTDWVMYEYTM 156
                     .999***********8666554444444455555*********87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 538 aa     Download sequence    
MELTSEPSSC SCLCGQRFPP GFRFQPTDEE LVVYYLKRKI CRQPIMRDVI GETDVYKREP  60
EELPELSKLK TGDRQWFFFS PRDRKYPNGA RSNRATKQGF WKVTGRDRII TCNSRNVGVK  120
KTLVFYKGRT PTIKPSSPKP TIKPERTDWV MYEYTMDEEE LKRCPSAQDY YALYRIFRKS  180
GIGPKNGEQY GAPFREEDWA DDDCLTVNPL VEQEKYTNQV NDVVNVESPI PNDFEISLVN  240
IEELLDLLED EPDLPVQNAI LHPTTPHNVQ ANVDVTQCST SQPQLPEAPE FTSAPVYHGL  300
NPQMVEEDYL EGFLEVDDLA GPEPSINNFN KPGEIMEIQQ YGYDMGTREA RHPNQPYANN  360
AENGMVNPVS TYFSDNHETM NSQQLYLNEN NEGSNRLWSP DQRCNIATPA EANHEVFHPA  420
TLGVVYDNHS LNDHPKGTNS NQITREDGAT NSRFSSALWG SLESIPATPA SAAESPAADM  480
AFEQTTRRSR VIARNMNTAS GNTSRSSGKS MSGFLCVFVL GVLCAAMLWI LLGTSSLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.16e-89NAC family protein