PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019175094.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | Dof | ||||||||
Protein Properties | Length: 233aa MW: 23996.6 Da PI: 8.0439 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 122.7 | 1.3e-38 | 24 | 82 | 3 | 61 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++l+cprCdstntkfCyynny+lsqPr+fCk+CrryWt+GG+lrnvPvGgg+rk+ ++ XP_019175094.1 24 PENLPCPRCDSTNTKFCYYNNYNLSQPRHFCKSCRRYWTRGGTLRNVPVGGGTRKQPSN 82 57899**************************************************9775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MSSDSGERRP GRMTGTAGQK STEPENLPCP RCDSTNTKFC YYNNYNLSQP RHFCKSCRRY 60 WTRGGTLRNV PVGGGTRKQP SNKRPRTNTL AASSPPDMPP REPFHSAGSG CEVNLNEAVP 120 DPGTASFTSL LGSPVGGDGA GFMSLGGFGL GLGDAGMHGF GFGLGMVDWP AETVGAAPSG 180 NVNGGGPTVG GPVGSSSCNT WQMGGGLVDG TLGDGGDYFG WPDLAISAPG RRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51700.1 | 2e-36 | Dof family protein |