PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019175013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 222aa MW: 25396.2 Da PI: 9.4028 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 80.6 | 1e-25 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n rqvtfskRr g++KKAeEL vLCda+va+i+fs tgkl++++s XP_019175013.1 9 KKIDNIAARQVTFSKRRRGLFKKAEELAVLCDADVALIVFSATGKLFDFAS 59 689*********************************************986 PP | |||||||
2 | K-box | 55.4 | 2.6e-19 | 85 | 170 | 17 | 99 |
K-box 17 lqqela...kLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 lqqe + +L kei+ re+R++ Ge+Le Lsl+eL++Le++L+ +l+++ ++K+e l+++i +lq k el een++L+++++ XP_019175013.1 85 LQQENSlqvRLSKEISDKTRELRRMGGEELEGLSLEELEELEKKLKVGLNRVSETKDEQLRNEIATLQYKGSELMEENNQLKQRVA 170 5555432238999999999***************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MTRKKIKIKK IDNIAARQVT FSKRRRGLFK KAEELAVLCD ADVALIVFSA TGKLFDFASS 60 SMKHILQKYV SHSSNIEKYP PLQFLQQENS LQVRLSKEIS DKTRELRRMG GEELEGLSLE 120 ELEELEKKLK VGLNRVSETK DEQLRNEIAT LQYKGSELME ENNQLKQRVA NDRRNGRIVG 180 DIMDRMIQED GESITKNSTT QPPLLQAADC SDTMLKLGLP FH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-51 | MIKC_MADS family protein |