PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019174898.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 582aa MW: 65606.8 Da PI: 4.4332

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019174898.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.4	2.3e-52	23	149	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppGfrFhPtdeelv +yLk+k+ +kkl l ++i e+d+yk++P+dLp +k+k+++++w+fFs+rd+ky++g r+nratk+gyWkatgkd+++++ XP_019174898.1 23 PPGFRFHPTDEELVLYYLKRKICHKKLLL-DAICETDVYKWDPEDLPelSKLKTGDRQWFFFSPRDRKYPNGARSNRATKHGYWKATGKDRSITC 116 9***********************988.89**********95449999************************************* PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kktLvfykgrap+g +tdWvmhey+l XP_019174898.1 117 -NSRAVGVKKTLVFYKGRAPTGIRTDWVMHEYTL 149 .999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MVMEVKITSN SSSSASLSDQ RFPPGFRFHP TDEELVLYYL KRKICHKKLL LDAICETDVY 60 KWDPEDLPEL SKLKTGDRQW FFFSPRDRKY PNGARSNRAT KHGYWKATGK DRSITCNSRA 120 VGVKKTLVFY KGRAPTGIRT DWVMHEYTLD EEEFRRCDSV RDYYALYKVF KKSGAGPKNG 180 EQYGAPFKEE DWDDDEYLNP KCSVDQKKSR NPVSDIPPIE NPKLNVPFQY PKDDLDGFLN 240 HIGNEPPPLM QPLSIDYSYD LEHLIGEEDS ESTLLDQSSR ELNVTEQTAL QQYNVQASFE 300 VTESGTSQPL LHEASEVTSS AVCNEQTQAV EEDFLEDFLE MDDLLSTEPD IHKFNMPVEK 360 SDTQLLNDFD GLSEFDLYQD ATMFLHDVGT SEGGQAAESY VNNGTVNQTS NYFSDYPEIV 420 NDQQLYFNEG NEVSDQLWMH DQSSDIFFPD DINQGAIPSG VGYDNNFMNH PAGPNPIQTA 480 RQDDATNSSL SSSLWAFVES IPTTPASAAE SALVNKAFER MSSFRRLRIN AINMNIAAGA 540 TSRSASKSRS GILCFSLLGV LCAILWVFIG TSFCVMGRCV SS

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MVMEVKITSN SSSSASLSDQ RFPPGFRFHP TDEELVLYYL KRKICHKKLL LDAICETDVY  60
KWDPEDLPEL SKLKTGDRQW FFFSPRDRKY PNGARSNRAT KHGYWKATGK DRSITCNSRA  120
VGVKKTLVFY KGRAPTGIRT DWVMHEYTLD EEEFRRCDSV RDYYALYKVF KKSGAGPKNG  180
EQYGAPFKEE DWDDDEYLNP KCSVDQKKSR NPVSDIPPIE NPKLNVPFQY PKDDLDGFLN  240
HIGNEPPPLM QPLSIDYSYD LEHLIGEEDS ESTLLDQSSR ELNVTEQTAL QQYNVQASFE  300
VTESGTSQPL LHEASEVTSS AVCNEQTQAV EEDFLEDFLE MDDLLSTEPD IHKFNMPVEK  360
SDTQLLNDFD GLSEFDLYQD ATMFLHDVGT SEGGQAAESY VNNGTVNQTS NYFSDYPEIV  420
NDQQLYFNEG NEVSDQLWMH DQSSDIFFPD DINQGAIPSG VGYDNNFMNH PAGPNPIQTA  480
RQDDATNSSL SSSLWAFVES IPTTPASAAE SALVNKAFER MSSFRRLRIN AINMNIAAGA  540
TSRSASKSRS GILCFSLLGV LCAILWVFIG TSFCVMGRCV SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-124	NAC family protein