PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019174170.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ZF-HD | ||||||||
Protein Properties | Length: 246aa MW: 27357.3 Da PI: 7.1528 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 99.9 | 1.8e-31 | 57 | 113 | 2 | 59 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 +++rYkeClkNhA+ +G havDGCgEfmp+ geeg+ ++lkCaAC+CHRnFHR+e e+ XP_019174170.1 57 TNYRYKECLKNHAVGIGRHAVDGCGEFMPA-GEEGSLDGLKCAACNCHRNFHRKEAES 113 5789*************************9.999*********************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MEMEMEFDEE REEEMEMEDM EEAGNYQTPA GRGMEGAPAG GVGRKSGGGS AAANTTTNYR 60 YKECLKNHAV GIGRHAVDGC GEFMPAGEEG SLDGLKCAAC NCHRNFHRKE AESEGYARHQ 120 SPHHHLHPLH HHFSTFSSYR SPHPSGYLHV TPPTQHRPLA LPSSSRDEED MSNPSSSGGG 180 GSKKRFRTKF TAEQKDKMLA LAERLGWRIQ KQDEAAVQQF CAEANVKSHV FKVWMHNNKH 240 TLGKKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 4e-70 | ZF-HD family protein |