PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019173753.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family C2H2
Protein Properties Length: 270aa    MW: 29615.5 Da    PI: 9.71
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019173753.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.0002295117123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_019173753.1  95 FSCNYCQRKFYSSQALGGHQNAH 117
                     89*****************9988 PP

Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MADGQMEKVE RDVPEAPPLR HDFTLQNSKD HVSVQGKAGD GDGQKRDMMC SSGGSDHRGS  60
SELNLIRHLD MEASRVPTDQ NLKVDAAAAA APRVFSCNYC QRKFYSSQAL GGHQNAHKRE  120
RILMKKEQRL GQHFMAAAAA FGRSSLGMGI HHRHHYSSIA SLPLHGTLHK PLGIQPHSMM  180
IKPSYMHSSS GIIKRPFFSQ QPAVGKLFGE NNCHISSSAS AGLLKEKINR PRIVVSSPPG  240
EAAIAEDLWT GSSSNHLETN RENLDLSLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.12e-31C2H2 family protein