PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019173753.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | C2H2 | ||||||||
Protein Properties | Length: 270aa MW: 29615.5 Da PI: 9.71 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.5 | 0.00022 | 95 | 117 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H XP_019173753.1 95 FSCNYCQRKFYSSQALGGHQNAH 117 89*****************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MADGQMEKVE RDVPEAPPLR HDFTLQNSKD HVSVQGKAGD GDGQKRDMMC SSGGSDHRGS 60 SELNLIRHLD MEASRVPTDQ NLKVDAAAAA APRVFSCNYC QRKFYSSQAL GGHQNAHKRE 120 RILMKKEQRL GQHFMAAAAA FGRSSLGMGI HHRHHYSSIA SLPLHGTLHK PLGIQPHSMM 180 IKPSYMHSSS GIIKRPFFSQ QPAVGKLFGE NNCHISSSAS AGLLKEKINR PRIVVSSPPG 240 EAAIAEDLWT GSSSNHLETN RENLDLSLRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80730.1 | 2e-31 | C2H2 family protein |