PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019173689.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 257aa MW: 29631.8 Da PI: 6.3681 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 139.2 | 2.5e-43 | 5 | 135 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 +pGfrF Pt+eel+++yL++k+eg++ +++ vi+ ++i+++ePw+Lpk + +e+++w+fF++r++++a+g r+ r+t++gyWkatg+ XP_019173689.1 5 TPGFRFYPTEEELLSFYLHNKLEGTRQDINCVIPMINIFDLEPWHLPKvsgelC-VGETEQWFFFVPRQEREARGGRPCRTTAAGYWKATGSPSY 98 69***************************888***************6456432.23677*********************************** PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v+s++++++g+kk++vfykg++p g+kt+W m+eyr+ XP_019173689.1 99 VYSSDNKVIGVKKSMVFYKGKSPCGRKTKWKMNEYRA 135 ***********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MAEITPGFRF YPTEEELLSF YLHNKLEGTR QDINCVIPMI NIFDLEPWHL PKVSGELCVG 60 ETEQWFFFVP RQEREARGGR PCRTTAAGYW KATGSPSYVY SSDNKVIGVK KSMVFYKGKS 120 PCGRKTKWKM NEYRAIEEQL PSSHLHPSYS SPLIPSPKLR HEMTLCRVYV ILRNFGSFDR 180 RPIGNMGTSQ EEVKMIPMEA INKCSESSVV QEEEEEEDFD DGMNVYATTG LTRMVKSPEP 240 FSGLERLINF QLSKWNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 5e-77 | NAC family protein |