PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019173188.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family GATA
Protein Properties Length: 286aa    MW: 31451.1 Da    PI: 4.896
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019173188.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.61.3e-16137172134
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C++Cg+++  Tp +Rrgpdg++tLCnaCGl ++ kg
  XP_019173188.1 137 CQHCGVSEngTPAMRRGPDGPRTLCNACGLVWANKG 172
                     ********************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MFSLPLLQIR SNCYLQAVLL LLGGIETPEN VPSTEFQSQQ CNKVLEGASP LAVCASTAPN  60
VPRRIASLMR FREKRKERCF EKKIRYTCRK EVAQRMHRKN GQFASMKESD KTSVDIFESG  120
DGKPGSDPVS VDRLRSCQHC GVSENGTPAM RRGPDGPRTL CNACGLVWAN KGILRDLSKG  180
GKNIAFSKSE NSNQNPDEEG SPEEMKPMLM GNENPLIGPA DQDFREAAEN YTDGSPIGIG  240
NSSINPDEEE TLDEFANASG SDFDISTSFD DEVDIHSHMG TDWPGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.11e-42GATA family protein