PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019172982.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ZF-HD
Protein Properties Length: 300aa    MW: 33145.3 Da    PI: 7.9735
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019172982.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.47.3e-3395150359
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     +vrYk ClkNhAas+Ggh++DGCgEfmps ge+gt++alkCaAC+CHRnFHR+e + 
  XP_019172982.1  95 SVRYKACLKNHAASMGGHVIDGCGEFMPS-GEDGTPDALKCAACDCHRNFHRKEIDG 150
                     79**************************9.999********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MEVRGSSQQQ KDMRILQNSI GGGYPSSLDR RNNGLIIENH HPMQTLDQLH LAQDDEAANP  60
DPDPGVLPAG PGNSAAVAAP PQVLPETSAN GSGNSVRYKA CLKNHAASMG GHVIDGCGEF  120
MPSGEDGTPD ALKCAACDCH RNFHRKEIDG EAPPPPYFPF TPAINNHHHR VHTPHSAPVA  180
MPPRNLHHYS HGLQVPPVMM AFGGGAPAES SSEDLNLFNH ARGQVLHNPS PFSVSRKRFR  240
TKFTQQQKDS MHEFAEKLGW KIQKQDEQQV LQFCSEMGIK RQVFKVWMHN NKQNFKKPQM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75240.15e-63ZF-HD family protein