PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019172967.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 209aa MW: 23962.1 Da PI: 8.4716 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.2 | 4.6e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++nrqvtfskRrng+lKKA+EL +LCdaev ++ifsstgkl+e++s XP_019172967.1 10 RIDNSTNRQVTFSKRRNGLLKKAKELGILCDAEVGLMIFSSTGKLHEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 72.9 | 9.5e-25 | 78 | 157 | 5 | 85 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkek 85 ++ ++ +++ + +q+e+a L+++++n+q+ +R+l+Ge L Ls+keLq+Le+qLe sl+ iR kK+++l++qi+el +k + XP_019172967.1 78 QSPQNPASELKFWQTEAAILRQQLHNMQEDHRKLMGE-LYGLSVKELQNLENQLEMSLRGIRMKKEQILIDQIQELTNKFQ 157 4444788999**************************8.9************************************998865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MGRGKVVIRR IDNSTNRQVT FSKRRNGLLK KAKELGILCD AEVGLMIFSS TGKLHEFAST 60 SMRSVIERYN KTQDESLQSP QNPASELKFW QTEAAILRQQ LHNMQEDHRK LMGELYGLSV 120 KELQNLENQL EMSLRGIRMK KEQILIDQIQ ELTNKFQVYG TRDPNTVNGD TISPYDFTIS 180 EESHAHIHLQ LSQPQPQNFS DRATALDST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 1e-80 | MIKC_MADS family protein |