PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019172635.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 208aa MW: 24167.6 Da PI: 9.6678 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94.8 | 3.9e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr g+lKKA+ELSvLCdaeva+i+fs++gklye+ss XP_019172635.1 9 KRIENATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIVFSPKGKLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 73.1 | 8.1e-25 | 81 | 172 | 8 | 99 |
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ e++ ++ ++e+a + ++++ L++++R+llGe+Les+s eLqq+e+qLe+sl++iR++Kn +++e i +l++ e+ l+++n +Lrk+le XP_019172635.1 81 RTVEQNIQHFKEEIATMSRNVDLLENTKRKLLGEGLESCSTDELQQIEEQLEQSLSNIRARKNFIYKERITKLKEEEETLRRHNAELRKRLE 172 467899**********************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MVRGKTEMKR IENATSRQVT FSKRRSGLLK KAFELSVLCD AEVALIVFSP KGKLYEFSSS 60 SPSKTIERYE TNSKNMGVHK RTVEQNIQHF KEEIATMSRN VDLLENTKRK LLGEGLESCS 120 TDELQQIEEQ LEQSLSNIRA RKNFIYKERI TKLKEEEETL RRHNAELRKR LEVKSLTLST 180 VQQDIDPQQK IMEVETQLFI GPPERSPH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22950.1 | 4e-64 | MIKC_MADS family protein |