PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019172633.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 209aa MW: 24254.7 Da PI: 9.6678 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94.8 | 3.9e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr g+lKKA+ELSvLCdaeva+i+fs++gklye+ss XP_019172633.1 9 KRIENATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIVFSPKGKLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 72.7 | 1.1e-24 | 82 | 173 | 8 | 99 |
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ e++ ++ ++e+a + ++++ L++++R+llGe+Les+s eLqq+e+qLe+sl++iR++Kn +++e i +l++ e+ l+++n +Lrk+le XP_019172633.1 82 RTVEQNIQHFKEEIATMSRNVDLLENTKRKLLGEGLESCSTDELQQIEEQLEQSLSNIRARKNFIYKERITKLKEEEETLRRHNAELRKRLE 173 467899**********************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MVRGKTEMKR IENATSRQVT FSKRRSGLLK KAFELSVLCD AEVALIVFSP KGKLYEFSSS 60 SSPSKTIERY ETNSKNMGVH KRTVEQNIQH FKEEIATMSR NVDLLENTKR KLLGEGLESC 120 STDELQQIEE QLEQSLSNIR ARKNFIYKER ITKLKEEEET LRRHNAELRK RLEVKSLTLS 180 TVQQDIDPQQ KIMEVETQLF IGPPERSPH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22950.1 | 2e-62 | MIKC_MADS family protein |