PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019172397.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | bHLH | ||||||||
Protein Properties | Length: 219aa MW: 25430 Da PI: 7.822 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 19.4 | 1.9e-06 | 18 | 65 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 + +E++RR+++++ + L +llP+ + +++ + + + ++v+YI+ Lq XP_019172397.1 18 KYVEKNRRNQLKTLYKHLFSLLPPhL---SQEGMALHDQVDETVKYIRWLQ 65 568*********************55...55559999**********9887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MKKMASRLPK TSPKLERKYV EKNRRNQLKT LYKHLFSLLP PHLSQEGMAL HDQVDETVKY 60 IRWLQNEVEK NKQKKEELQK MMMMMNSSSR KRPHYSSCDD HRSSPLIQVL DIGPGTHVVL 120 VNDLEGVAGF HNIIRILHQH GLEVANATFQ QHGNSMLQVV HQQGFGGTML SEKLKQVLYG 180 SSCPEETTEQ QSSDSWEDYD IWGFHSLEPF QELQYPPPY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 8e-15 | bHLH family protein |