PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019172380.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | bHLH | ||||||||
Protein Properties | Length: 246aa MW: 27808.6 Da PI: 7.422 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 21.2 | 5.3e-07 | 25 | 70 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + +E++RR++++s + L +llP ++++ + L ++v+YIk L+ XP_019172380.1 25 KYIEKNRRNHLKSLYTDLFSLLPAH----QERMALPDQLDETVKYIKCLE 70 569*********************8....6999999***********985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MGREKGQSSR LTTTTKTPAP KLERKYIEKN RRNHLKSLYT DLFSLLPAHQ ERMALPDQLD 60 ETVKYIKCLE NQLEKSRQKK EELLQKSRKT PNSSSCRNCI PAAGEQTEPP EIQVVDTSPG 120 MSVVLINGLE SISQFYGIIR VLHKQQGLQV TNATFQIHGN STLQVAHEQV GKSEMGMIAE 180 RLKVVIKGCP GGEAIESEPL NSWDNNYDIE RDNLGFPVLE QFLVQCQNPP PSFFWTAGNE 240 YYCAQN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 6e-24 | bHLH family protein |