PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019172355.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 263aa MW: 30025.7 Da PI: 9.0195

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019172355.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	144.9	4.4e-45	5	136	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 pGfrFhPt++el+++yL+ v++kkl+ ++i ++iy+++PwdLp k+ ++ +e+ewyfF+ rd+k+ g ++nr+t +g+Wkatg+d+++ s XP_019172355.1 5 LPGFRFHPTEQELLNFYLRGAVNAKKLRS-DIIGFLNIYQHDPWDLPgKASEGqGEREWYFFVARDRKHG-GGKANRTTGNGFWKATGSDRPIRS 97 59**********************999.99***********5433333677******986.889***************** PP NAM 95 k.....kgelvglkktLvfykgrapkgektdWvmheyrl 128 + k+++ g++ktLvfy+grap+g++tdWvm+e+rl XP_019172355.1 98 NspsegKNKVLGMRKTLVFYQGRAPRGRRTDWVMNEFRL 136 9999888888*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MEVQLPGFRF HPTEQELLNF YLRGAVNAKK LRSDIIGFLN IYQHDPWDLP GKASEGQGER 60 EWYFFVARDR KHGGGKANRT TGNGFWKATG SDRPIRSNSP SEGKNKVLGM RKTLVFYQGR 120 APRGRRTDWV MNEFRLSDTT CTLLKEDVVL CKVYRKATSF KELEQKSLKE EQGYAGAAYP 180 SPASGGDRLG YEVPQKDFGS TFFHVPTIFS SDQESNTQKM CAKHGFVQQE EDVLSEEVVG 240 SLGNLFHQVR DRDRDNWSLF AMY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	7e-68	NAC family protein