PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019172234.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 303aa MW: 34072.9 Da PI: 4.8613 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 305.6 | 1.8e-93 | 12 | 303 | 28 | 301 |
GAGA_bind 28 lmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvenslasalpvgvqvlsgtksidslqqlsepqleds 122 m+++aerda+i ern+al e+k a+aerdma lqrd+a+aern al erdn++ al+l+e s++ ++ v+ ++g+++i+ q+ ++ ++ XP_019172234.1 12 YMAIMAERDAAILERNMALDERKRALAERDMAMLQRDAAIAERNTALEERDNAISALKLRESSMNDED--IVSKSPGAEHIHYQQE-MHEMISAA 103 69*********************************************************999977665..7888999999996666.77788888 PP GAGA_bind 123 avelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesader...........................skae 190 a++ +e+ +++ +++++ ++++ ++++k +++k+ k kka+k + ++++v+ e + ++ + XP_019172234.1 104 AYDPTENLTNDPFNVTDPTPQTANNPRKV--RQPKESKPKKASKLARVV--KREEVEVEDL--SwqavstfddwddgncgefvdasdeeqdKHLD 192 99977777777777777666655554443..444444444444444422..2233333332..12235668899************999887777 PP GAGA_bind 191 kksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDL 285 + d++l++v+ D s++PvPvCsCtG+++ CYkWGnGGWqSaCCtttiS+yPLP+ +++r +R++grKmS +af+klL++L+aeGydls p+DL XP_019172234.1 193 TWDEDFGLEQVNSDVSAMPVPVCSCTGTPQPCYKWGNGGWQSACCTTTISMYPLPQASHKRYSRVGGRKMSASAFSKLLSRLTAEGYDLSAPLDL 287 7789******************************************************************************************* PP GAGA_bind 286 kdhWAkHGtnkfvtir 301 kdhWAkHGtn++ t++ XP_019172234.1 288 KDHWAKHGTNRYSTVK 303 **************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MMDQNNSTIR TYMAIMAERD AAILERNMAL DERKRALAER DMAMLQRDAA IAERNTALEE 60 RDNAISALKL RESSMNDEDI VSKSPGAEHI HYQQEMHEMI SAAAYDPTEN LTNDPFNVTD 120 PTPQTANNPR KVRQPKESKP KKASKLARVV KREEVEVEDL SWQAVSTFDD WDDGNCGEFV 180 DASDEEQDKH LDTWDEDFGL EQVNSDVSAM PVPVCSCTGT PQPCYKWGNG GWQSACCTTT 240 ISMYPLPQAS HKRYSRVGGR KMSASAFSKL LSRLTAEGYD LSAPLDLKDH WAKHGTNRYS 300 TVK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42520.2 | 4e-83 | BBR-BPC family protein |