PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019172143.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 402aa MW: 44854.8 Da PI: 7.6612

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019172143.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.4	7e-54	22	149	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL+ kv + +++ +i+evd++++ePw+Lp +k +e+ewyfFs rd+ky+tg r+nrat +gyWkatgkd+ev+s+ XP_019172143.1 22 LPPGFRFHPTDEELITFYLASKVFHGTFSG-IHITEVDLNRCEPWELPDVAKMGEREWYFFSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSA 115 79***********************999.78***********8888899**********************************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g+l g+kktLvfy+grap+gekt+Wvmheyrl XP_019172143.1 116 sSGALLGMKKTLVFYRGRAPRGEKTKWVMHEYRL 149 78889*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MLGIEDILCE LNREEDNGEQ GLPPGFRFHP TDEELITFYL ASKVFHGTFS GIHITEVDLN 60 RCEPWELPDV AKMGEREWYF FSLRDRKYPT GLRTNRATGA GYWKATGKDR EVYSASSGAL 120 LGMKKTLVFY RGRAPRGEKT KWVMHEYRLD GHFSCRHTCK EEWVICRIYH KIGEKRNAII 180 MAQAAGGGGQ SYPTLKTLTS SANVALPPFP EMQSQNPMQH HHHHHKSIVF HHHQENDLKS 240 LNHHHPLLPQ TNHLGLLPIN GVLSSSFSAI TCNKAAATTS KANTDKYNML DCNNTILLPS 300 SSSSSILFKS QTGASKSNAI AATANCKISP CHLSHTLKYQ NNPNPLFYGM GIGMDAALET 360 MMPSAAPTFD DMSTSSEAFT RTCSQMVDPP IQLTADSWPM DL

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MLGIEDILCE LNREEDNGEQ GLPPGFRFHP TDEELITFYL ASKVFHGTFS GIHITEVDLN  60
RCEPWELPDV AKMGEREWYF FSLRDRKYPT GLRTNRATGA GYWKATGKDR EVYSASSGAL  120
LGMKKTLVFY RGRAPRGEKT KWVMHEYRLD GHFSCRHTCK EEWVICRIYH KIGEKRNAII  180
MAQAAGGGGQ SYPTLKTLTS SANVALPPFP EMQSQNPMQH HHHHHKSIVF HHHQENDLKS  240
LNHHHPLLPQ TNHLGLLPIN GVLSSSFSAI TCNKAAATTS KANTDKYNML DCNNTILLPS  300
SSSSSILFKS QTGASKSNAI AATANCKISP CHLSHTLKYQ NNPNPLFYGM GIGMDAALET  360
MMPSAAPTFD DMSTSSEAFT RTCSQMVDPP IQLTADSWPM DL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76420.1	1e-104	NAC family protein