PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019172056.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 353aa MW: 40238 Da PI: 5.083

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019172056.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.4	9.4e-56	9	138	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL+ k ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v XP_019172056.1 9 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLQdKcrIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAV 102 69**************************.9***********943432233667******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ k +l+g++ktLvfykgrap+g+ktdW+mheyrle XP_019172056.1 103 YD-KAKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLE 138 .999*****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MDTDESCTVP PGFRFHPTDE ELVGYYLRKK VASQKIDLDV IRDIDLYRIE PWDLQDKCRI 60 GYEEQNEWYF FSHKDKKYPT GTRTNRATMA GFWKATGRDK AVYDKAKLIG MRKTLVFYKG 120 RAPNGQKTDW IMHEYRLESE ENGPPQEEGW VVCRAFKKRI TGQAKSMESW ESNFLYDEPN 180 INNMDYMTRQ AAAAAAPSNF MAAQTFLCKQ ELEASENLTF MHADQLFNQL PQLQSPSLPL 240 LKTPLLPENH RSNASEDDAS AGEQIKKMNC VSDKKVTDWR ALDKFVASQL SHDVNQESFE 300 DHHGCDEMGS LLLLQSEMRD NNGGGGGGSG RLNDFLSSGS SEFDNIGICI FDK

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MDTDESCTVP PGFRFHPTDE ELVGYYLRKK VASQKIDLDV IRDIDLYRIE PWDLQDKCRI  60
GYEEQNEWYF FSHKDKKYPT GTRTNRATMA GFWKATGRDK AVYDKAKLIG MRKTLVFYKG  120
RAPNGQKTDW IMHEYRLESE ENGPPQEEGW VVCRAFKKRI TGQAKSMESW ESNFLYDEPN  180
INNMDYMTRQ AAAAAAPSNF MAAQTFLCKQ ELEASENLTF MHADQLFNQL PQLQSPSLPL  240
LKTPLLPENH RSNASEDDAS AGEQIKKMNC VSDKKVTDWR ALDKFVASQL SHDVNQESFE  300
DHHGCDEMGS LLLLQSEMRD NNGGGGGGSG RLNDFLSSGS SEFDNIGICI FDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	1e-133	NAC family protein