PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019171865.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | HSF | ||||||||
Protein Properties | Length: 211aa MW: 24151.6 Da PI: 10.0117 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 108.8 | 4.2e-34 | 32 | 132 | 2 | 103 |
HHHHHHHHHC........TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXX CS HSF_DNA-bind 2 Flkklyeile........deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkk 88 Fl+k+y+ile de+ ++sw+++g+ fvv+ ++ef++++Lp+yFkh+nf+SFvRQLn+YgFkkv+ ++ weF+h++F++ XP_019171865.1 32 FLTKTYDILEeedekrrrDEKAAAVVSWNAHGDGFVVWSPTEFSDHMLPRYFKHNNFSSFVRQLNTYGFKKVTPKR---------WEFQHEKFQR 117 9*********77777776679****************************************************999.........********** PP XXXXXXXXXXXXXXX CS HSF_DNA-bind 89 gkkellekikrkkse 103 g+++ll i rkk e XP_019171865.1 118 GRRHLLVGIARKKAE 132 ************975 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 211 aa Download sequence |
MTAGSPAAAT GRKAAAAGKQ SSLPGTKCPA PFLTKTYDIL EEEDEKRRRD EKAAAVVSWN 60 AHGDGFVVWS PTEFSDHMLP RYFKHNNFSS FVRQLNTYGF KKVTPKRWEF QHEKFQRGRR 120 HLLVGIARKK AEPSAFPAYL RANYEEEEDT ITSSTTTTLL SSSRLLLMNL LEDNKKLRKE 180 RMELQMQIAH YKTLQMRLLE CLSSQCMGSQ Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G62020.1 | 3e-36 | HSF family protein |