PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019171731.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | bHLH | ||||||||
Protein Properties | Length: 417aa MW: 45674.7 Da PI: 6.7481 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.9 | 0.0001 | 318 | 350 | 17 | 54 |
HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ L++l+ + +K + a++L +A+eYIk L XP_019171731.1 318 GDRVTALQQLVSPF-----GKTDTASVLHEAIEYIKFL 350 55666677777776.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 417 aa Download sequence |
MADDFMTAGV CGGGSWWNPA RSMFGASPCS AATINDMGNF AWANNDDHHH HHQLVNMKGR 60 SSDESCGSAS DGSSVVLQEL PKSHHQTHNM SMDSTHLHML GIGLSPSSTA TTDWNQALVQ 120 TNERAMLQED RNSRLNYGQE IGVECSDSSF KPVAKDFSTS TPSATNFAPS YNYPSNLLQT 180 LLDSDPQPQP QQPLISNQQI SYAPPPPANF RPNLNDFSPP LLKPTFPNAA ASFWNQSPAS 240 LNDVRAATFL PSTQSQFLPS VFSDKLSKPS RKSSNVEEAR QSSSMAKKAS NQEAAFKRPR 300 IETPSPLPTF KVRKEKLGDR VTALQQLVSP FGKTDTASVL HEAIEYIKFL HDQVNVLSAP 360 YLKNGCSVSQ HHQQDEEGRK AELRSQGLCL VPISSTFPVA TETTSDFWTP TFGASFR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61660.1 | 5e-62 | bHLH family protein |