PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019171616.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 266aa MW: 29831.5 Da PI: 7.9798

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019171616.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	21.9	4e-07	21	42	4	25
G2-like 4 lrWtpeLHerFveaveqLGGse 25 ++W+ +LH+rF ++ve+LGG++ XP_019171616.1 21 IKWSANLHHRFFNVVERLGGKK 42 79******************86 PP
2	G2-like	78.1	1.1e-24	62	115	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr +Wtp+LH+rF+eav+ LGG e AtP+tile+m+ k Ltl+ v+SHLQ +R XP_019171616.1 62 PRFKWTPDLHRRFLEAVQFLGGLECATPRTILEVMDEKELTLNRVRSHLQIHRA 115 89************************************************9996 PP
3	Myb_DNA-binding	37.4	6.1e-12	65	111	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 +WT++++ ++++av+ lGg t++tI + m k +tl+ ++s++q XP_019171616.1 65 KWTPDLHRRFLEAVQFLGGLecaTPRTILEVMDeKELTLNRVRSHLQ 111 7***************88************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MEIIIDFMEL FLRNRNTINS IKWSANLHHR FFNVVERLGG KKGGQSSSCP ENPTGTRLIY 60 PPRFKWTPDL HRRFLEAVQF LGGLECATPR TILEVMDEKE LTLNRVRSHL QIHRANCFDP 120 EQLAIETQAA LAQLAWAASL PYPYGYPPLY SASPPPPAAL YSLPLWPQLP SPPARLYIGP 180 VGPMPPTIPP SMRMMEYSAP AAPKTIIFKK LFPKGRPVPI DVDETPELMM AGDHINSRPS 240 SSAAREEGQD DDPLDLTLSI RPPSCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	2e-16	G2-like family protein