PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019170924.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 264aa    MW: 28477.4 Da    PI: 10.0892
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019170924.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.9e-194393256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr ++ +gr++AeIrdp   gk+ r++l++f+ aeeAa+a+++a+++++g+
  XP_019170924.1 43 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLETFDMAEEAARAYDNAAREFRGA 93
                    6********.**********8...557*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MGKFVISHFG LILFALFNKG AAVVVAVPAV DCNVNGVRKE QVHYRGVRKR PWGRYAAEIR  60
DPGKKSRVWL ETFDMAEEAA RAYDNAAREF RGAKAKTNFP LAEERIPLDF CARFDMNRNA  120
CEKDGGGGGG GGKNSNHHSP SQSSTVESSS RDTVLVDSSS LLDLNVGGRF SAVNLPYQSR  180
HLRVAPVVVC GYPPAAVVHP ASHVFYFNAL ACAAQFRLPS TPDSRLPIFT TAASAAPEAA  240
LLRASPTPPP WSKPIAISNL KKTA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.15e-24ERF family protein