PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019170916.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | WRKY | ||||||||
Protein Properties | Length: 306aa MW: 32492.6 Da PI: 5.9925 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 104.3 | 6.6e-33 | 163 | 220 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers+edp+vv++tYeg+H h+ XP_019170916.1 163 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTVVITTYEGQHCHH 220 8******************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence |
MDDEGNKFDH REFTADSSGW ALRGDADGAY YFGDGGVDKE ESSILSDFGW NFQPLDGLHG 60 AGGGGGGGGV GAFDLIHSDL AGNNGCVSGS GAADESPSGD GEAAAPASSS SSEEAAEKPS 120 SSSASRPPPP ADTTSSKVKK KGPKRIKQAR FAFMTKSEVD HLEDGYRWRK YGQKAVKNSP 180 FPRSYYRCTN SKCTVKKRVE RSSEDPTVVI TTYEGQHCHH AVGFRGGFIG HEASAYMARL 240 NPLAVQSYLP GLANQSYTLP IQSPQNLTHN IESHASPDPS RGPTPPQLPP DEGLLGDMVP 300 PGMWNN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69310.2 | 1e-56 | WRKY family protein |