PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019170704.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 297aa MW: 33734.2 Da PI: 8.5498 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 173.2 | 7.6e-54 | 10 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL++++++k++++ ++i+evd+yk++Pw+Lp k+ +e+ewyfF++rd+ky++g r+nra+ sgyWkatg+dk+++s XP_019170704.1 10 LPPGFRFHPTDEELIMYYLRNQATSKPCPV-SIIPEVDVYKFDPWELPDKAGFGENEWYFFTPRDRKYPNGIRPNRAAVSGYWKATGTDKAIYS- 102 79****************************.89***************988899****************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ vg+kk Lvfy+g+ pkg+ktdW+mheyrl XP_019170704.1 103 GSKYVGVKKALVFYQGKPPKGTKTDWIMHEYRL 135 999****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MVAKNRSSDL PPGFRFHPTD EELIMYYLRN QATSKPCPVS IIPEVDVYKF DPWELPDKAG 60 FGENEWYFFT PRDRKYPNGI RPNRAAVSGY WKATGTDKAI YSGSKYVGVK KALVFYQGKP 120 PKGTKTDWIM HEYRLSDSRS HPPNKQNGSM RLDDWVLCRI YKKKSMGSTN RAMEIMKVEV 180 ETQPQVISMN NCEPLIGSGP QGLILPRPCS LTHLLELGYL GSIPQLLGDE DNNNNFQNYP 240 NLDHHHQSPL MGSSSGNVPF AIGETPPQHQ WQYSSQQSGF SNQPMPIFVN PVAFQFQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 1e-109 | NAC family protein |