PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019170240.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ARF | ||||||||
Protein Properties | Length: 664aa MW: 72936.2 Da PI: 8.3932 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 78.2 | 8.6e-25 | 154 | 255 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F ++ + XP_019170240.1 154 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyK-QQRPSQELVARDLHGITWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRS--GD 245 99****************************963.3445679************************************************54..68 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +el+++++r+ XP_019170240.1 246 GELRLGIRRA 255 8899*99986 PP | |||||||
2 | Auxin_resp | 106.7 | 2.6e-35 | 282 | 363 | 1 | 82 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +++a+st+ vF+v+YnPr s s+Fvv+++k++++l +++++G Rfk++feted++err++G+v+gv d+dpvrWp+SkWrsL XP_019170240.1 282 VVNATSTRGVFNVCYNPRDSLSKFVVPYRKFSRSLLHPFAPGVRFKLHFETEDAAERRYTGLVIGVGDVDPVRWPGSKWRSL 363 68999***************************************************************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 664 aa Download sequence |
MMMMSGLIDL NTVNNGDVDG EETAAATSPD NSDLTESSPP PAAGLLCMEL WHACAGPLIS 60 LPKKGSAVVY LAQGHLEHLS DYPAVAYNLP PHVFCRVVDV KLHAEVATDE VYAQVSLVPD 120 NLIEQKWRNG EVEVDNEEVD TEGDGKSRTP PHMFCKTLTA SDTSTHGGFS VPRRAAEDCF 180 PPLDYKQQRP SQELVARDLH GITWKFRHIY RGQPRRHLLT TGWSAFVNKK KLVSGDAVLF 240 LRSGDGELRL GIRRAAQAKF GSPSSALGPF SQRLNVSGIL DVVNATSTRG VFNVCYNPRD 300 SLSKFVVPYR KFSRSLLHPF APGVRFKLHF ETEDAAERRY TGLVIGVGDV DPVRWPGSKW 360 RSLLVRWDDP DDTRHNRVSP WEIEPTGTVT GPINVVVPAA KRTRIGEEDF RVHGDRTVVL 420 DIRNPSRLPV LQGQEVFQVN KPYDGSDPQR AVYFPGFDSS GVSTRGRNVR ALLGDYAGKS 480 KESIGFAESC RFNKVLQGQE TYLNSPPYRR GGIATNHLQQ PHRSGIIVGI QVPSHSTRWS 540 STPIPNHHPP MQQQQPSSPL VSPPSVLMFQ QATSPAPATF HKQSGFSHLL GPQSSCRIFG 600 FPLSEGRRSA ASGEERDSSH GETTSTTPLS GNEARVLLKP QAIPSAMGSS YPKASREVLL 660 DIAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33860.1 | 1e-164 | ARF family protein |