PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019170214.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

VOZ

Protein Properties

Length: 541aa MW: 59937.8 Da PI: 7.3499

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019170214.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	420	3.9e-129	261	480	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewl...qdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwna 92 pppsaflgpkcalwdc+rpa gs+w+ qdycs +ha+la neg g p+lrp gi+lkd+llf+alsak+qgk+vg+pecegaatakspwna XP_019170214.1 261 PPPSAFLGPKCALWDCPRPAMGSDWCqksQDYCSDYHASLAPNEGYIGHPPILRPMGIGLKDNLLFQALSAKAQGKDVGVPECEGAATAKSPWNA 355 89*********************944459************************************************************ PP VOZ 93 aelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlel 187 +elfdl+++egetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvmkefgglkrsyymdpqp++++ewhlyeyein++d++alyrlel XP_019170214.1 356 PELFDLKVVEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMKEFGGLKRSYYMDPQPMKNLEWHLYEYEINNYDTCALYRLEL 450 ******************************************************************************************* PP VOZ 188 klvdekksakgkvskdsladlqkklgrlta 217 klvd+kks+kgkv++ s+adlqk++grl+a XP_019170214.1 451 KLVDGKKSPKGKVNNPSVADLQKQMGRLNA 480 *************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 541 aa Download sequence
MLLPRTQSHL IDKKLLSTPQ LSLSTPPKAA LFCLSRCSAQ PVLTRLRLKV KAISLRMGKG 60 SKSGVGKSAS YQVFKDRAKN RVDDLQGMFT DLQSLRKESR TSEVAVLEEQ LNQVLREWKA 120 ELNEPSPASS LQGGSLGFNT SDLCRLVQLG EEEDDATSAL AALKSEPDAQ KVSGAAGYQE 180 GLNVAQVLQE QNLQEQNQLV DQSKNAPLGV NNVGISNVGP AQLGDYQSYD FHQDFEQQYF 240 PGFDCVNLCL EDVLPAIHIN PPPSAFLGPK CALWDCPRPA MGSDWCQKSQ DYCSDYHASL 300 APNEGYIGHP PILRPMGIGL KDNLLFQALS AKAQGKDVGV PECEGAATAK SPWNAPELFD 360 LKVVEGETIR EWLFFDKPRR AFESGNRKQR SLPDYNGRGW HESRKQVMKE FGGLKRSYYM 420 DPQPMKNLEW HLYEYEINNY DTCALYRLEL KLVDGKKSPK GKVNNPSVAD LQKQMGRLNA 480 EFPPDTKRTV KGRAKANAKG NTGNIPSAPN PTVPNSEGLC YTTAPPPYDY VINDLSGYYI 540 T

Sequence ? help Back to Top

Protein Sequence Length: 541 aa Download sequence

MLLPRTQSHL IDKKLLSTPQ LSLSTPPKAA LFCLSRCSAQ PVLTRLRLKV KAISLRMGKG  60
SKSGVGKSAS YQVFKDRAKN RVDDLQGMFT DLQSLRKESR TSEVAVLEEQ LNQVLREWKA  120
ELNEPSPASS LQGGSLGFNT SDLCRLVQLG EEEDDATSAL AALKSEPDAQ KVSGAAGYQE  180
GLNVAQVLQE QNLQEQNQLV DQSKNAPLGV NNVGISNVGP AQLGDYQSYD FHQDFEQQYF  240
PGFDCVNLCL EDVLPAIHIN PPPSAFLGPK CALWDCPRPA MGSDWCQKSQ DYCSDYHASL  300
APNEGYIGHP PILRPMGIGL KDNLLFQALS AKAQGKDVGV PECEGAATAK SPWNAPELFD  360
LKVVEGETIR EWLFFDKPRR AFESGNRKQR SLPDYNGRGW HESRKQVMKE FGGLKRSYYM  420
DPQPMKNLEW HLYEYEINNY DTCALYRLEL KLVDGKKSPK GKVNNPSVAD LQKQMGRLNA  480
EFPPDTKRTV KGRAKANAKG NTGNIPSAPN PTVPNSEGLC YTTAPPPYDY VINDLSGYYI  540
T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	VOZ family protein