PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019169268.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | SRS | ||||||||
Protein Properties | Length: 204aa MW: 22307.9 Da PI: 8.4058 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 95.9 | 7.8e-30 | 18 | 76 | 5 | 62 |
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqla.aassk 62 +++CqdCGnqakkdC++ RCR CCksrgf+C thvkstWvp+++rr r+ + + ++ sk XP_019169268.1 18 GSRCQDCGNQAKKDCSFLRCRSCCKSRGFQCPTHVKSTWVPVSRRRPRHLAIHqTSFSK 76 569*******************************************9955444033333 PP | |||||||
2 | DUF702 | 69.4 | 1.1e-21 | 92 | 146 | 100 | 154 |
DUF702 100 letsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +++P+evs +a frcvr+ssv ++ +++aYq++v+i+G vfkGiLydqG+e+ XP_019169268.1 92 EVERNFPAEVSLPAEFRCVRLSSVGNEVDQFAYQSTVTIAGRVFKGILYDQGPES 146 23455************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MMRDNEEEEE GGAVGGSGSR CQDCGNQAKK DCSFLRCRSC CKSRGFQCPT HVKSTWVPVS 60 RRRPRHLAIH QTSFSKRTRQ LPIQTPPFSG SEVERNFPAE VSLPAEFRCV RLSSVGNEVD 120 QFAYQSTVTI AGRVFKGILY DQGPESRYDV TGESSSAGVQ HHNLITAAAV ADGGATTAAS 180 PHPYPSPFST FMPPGTHFFS YPKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66350.1 | 1e-48 | SRS family protein |