PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019169214.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 227aa MW: 26237.7 Da PI: 7.4179 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 81.7 | 4.7e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 kri++ s rqvtf+kRr g++KKA+ELS+LCd+ev +i+fs tgkl +yss XP_019169214.1 9 KRIDSLSARQVTFAKRRRGLFKKAHELSTLCDVEVGLIVFSATGKLSDYSS 59 79***********************************************96 PP | |||||||
2 | K-box | 41.2 | 6.9e-15 | 102 | 176 | 23 | 97 |
K-box 23 kLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 L ke++ +r +R+l GedL++L ++eL +Le+q e++l+++ ++K+++ l++++ l kke l++en ++++ XP_019169214.1 102 MLLKEYKDKERHLRQLNGEDLQELGMEELIRLEKQTERGLSRVQKTKDDIRLKEMSALMKKEATLKDENAQMKQF 176 5666777778999*********************************************************99885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MVRQRIEIKR IDSLSARQVT FAKRRRGLFK KAHELSTLCD VEVGLIVFSA TGKLSDYSSS 60 SMVQVLARHN MHSEKNENDL EHHHHPQPPL QLQQDNGCTH AMLLKEYKDK ERHLRQLNGE 120 DLQELGMEEL IRLEKQTERG LSRVQKTKDD IRLKEMSALM KKEATLKDEN AQMKQFFDQM 180 GSSMAAQEDK PPPDQQGQYD DSVTKTYNLA HHNHLRDCNS DTFLTLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 9e-49 | MIKC_MADS family protein |