PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019168886.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | B3 | ||||||||
Protein Properties | Length: 245aa MW: 28368.5 Da PI: 8.8725 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 38.3 | 2.4e-12 | 115 | 199 | 1 | 77 |
EEEE-..-HHHHT.T-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT CS B3 1 ffkvltpsdvlks.grlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkeg 77 f+k+ t dv+++ +rl+l+k+ +++ +++ +++ +t ++++g+++e++++ + ++ yvl +GWk+F ++ngL ++ XP_019168886.1 115 FEKQVTVTDVNEEqNRLSLSKNEVTRSilpllncHEDHCRGVPVTAYNPDGKEYEMTFKSWSERKFYVLNGGWKRFFQENGLVVR 199 677777777766659********98889***999666778999***************************************865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MAKKTHHAAF QPPEPENIEE EEDLAAAANI LICMSAANLE KREAIELERM KMNFHYNSGL 60 RIRDDNNNNN NRAEPPALAA RVHSRCSVDG TPLPRYPPIP FLLGKIDLSA CSMPFEKQVT 120 VTDVNEEQNR LSLSKNEVTR SILPLLNCHE DHCRGVPVTA YNPDGKEYEM TFKSWSERKF 180 YVLNGGWKRF FQENGLVVRR HWVTVWMFRH SQTRKLCFAL TWKFIPMDHP CTIKQVRNSK 240 SVSKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G03170.1 | 8e-30 | B3 family protein |