PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019168833.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 290aa MW: 32549.6 Da PI: 7.2996 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.6 | 2e-20 | 94 | 143 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae Aa a+++a+++++g XP_019168833.1 94 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAALAYDEAALRFKG 143 7********.**********94....45************************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
TVDRHHGKRP FSSDEPEEKE SGGGATAESI FPVYSARSLH DMTAMVSALS QVIGNNNTST 60 ATSQSNPLHG NSLMPQTQQP NIQQQQEGRE RKRHYRGVRQ RPWGKWAAEI RDPKKAARVW 120 LGTFDTAEAA ALAYDEAALR FKGNKAKLNF PERVQPKTTD FGYLTTLQQQ HFHAAASVLS 180 PSQYHHFSQP QYHHPNLDDH YAAQHYATLH AQAPTTNDNN YLNLFPNYEV SVFRPMGTSA 240 TTTPFVSQQQ FQFSQFPYGT TSSSSAASGD AHNAPDEDNW EEFDIKNVRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07310.1 | 7e-45 | ERF family protein |