PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019168630.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 376aa MW: 42139.8 Da PI: 6.7337 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.5 | 2.3e-52 | 11 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yL+kkv+++k++l +vi++vd++k+ePwd+++ k+ + +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk + XP_019168630.1 11 VPPGFRFHPTEEELLHYYLRKKVTSEKIDL-DVIRDVDLNKLEPWDIQEkcKIGSgPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVI 104 69****************************.9***************952444443456************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +s + + +g++ktLvfykgrap+g+k+dW+mheyrl XP_019168630.1 105 YS-NCKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 139 **.8889***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 376 aa Download sequence |
MNLSVNGQSQ VPPGFRFHPT EEELLHYYLR KKVTSEKIDL DVIRDVDLNK LEPWDIQEKC 60 KIGSGPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYSNCKR IGMRKTLVFY 120 KGRAPHGQKS DWIMHEYRLD DNSPETTGTS LVGELSSAPE EGWVVCRVFK KKNYHKALES 180 PHSSLVQTHP GNDGVLDQIL TYMGRSSSSS KQQNGAKNGN NIIINGDDTM QFSHAIQAAR 240 FLHLPPLETQ SAMEILSPHH LPNHAFEDLL AETEPSCNNT EPADDMKTAA GPADWVALDR 300 LVASQLNGQV ETSKSYVADD LSDGLYFPIV DHHRPFGRPN NHHHNSQVNA GGNDVEFWSY 360 TNSSSSPSDP LSHLSV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46770.1 | 1e-108 | NAC family protein |