PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019168629.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 377aa MW: 42268 Da PI: 6.7337

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019168629.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.4	2.3e-52	11	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yL+kkv+++k++l +vi++vd++k+ePwd+++ k+ + +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk + XP_019168629.1 11 VPPGFRFHPTEEELLHYYLRKKVTSEKIDL-DVIRDVDLNKLEPWDIQEkcKIGSgPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVI 104 69**************************.9***********952444443456******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +s + + +g++ktLvfykgrap+g+k+dW+mheyrl XP_019168629.1 105 YS-NCKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 139 .8889***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MNLSVNGQSQ VPPGFRFHPT EEELLHYYLR KKVTSEKIDL DVIRDVDLNK LEPWDIQEKC 60 KIGSGPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYSNCKR IGMRKTLVFY 120 KGRAPHGQKS DWIMHEYRLD DNSPETTQGT SLVGELSSAP EEGWVVCRVF KKKNYHKALE 180 SPHSSLVQTH PGNDGVLDQI LTYMGRSSSS SKQQNGAKNG NNIIINGDDT MQFSHAIQAA 240 RFLHLPPLET QSAMEILSPH HLPNHAFEDL LAETEPSCNN TEPADDMKTA AGPADWVALD 300 RLVASQLNGQ VETSKSYVAD DLSDGLYFPI VDHHRPFGRP NNHHHNSQVN AGGNDVEFWS 360 YTNSSSSPSD PLSHLSV

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MNLSVNGQSQ VPPGFRFHPT EEELLHYYLR KKVTSEKIDL DVIRDVDLNK LEPWDIQEKC  60
KIGSGPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYSNCKR IGMRKTLVFY  120
KGRAPHGQKS DWIMHEYRLD DNSPETTQGT SLVGELSSAP EEGWVVCRVF KKKNYHKALE  180
SPHSSLVQTH PGNDGVLDQI LTYMGRSSSS SKQQNGAKNG NNIIINGDDT MQFSHAIQAA  240
RFLHLPPLET QSAMEILSPH HLPNHAFEDL LAETEPSCNN TEPADDMKTA AGPADWVALD  300
RLVASQLNGQ VETSKSYVAD DLSDGLYFPI VDHHRPFGRP NNHHHNSQVN AGGNDVEFWS  360
YTNSSSSPSD PLSHLSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-108	NAC family protein