PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019168627.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 378aa MW: 42367.1 Da PI: 6.7337 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.4 | 2.3e-52 | 11 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yL+kkv+++k++l +vi++vd++k+ePwd+++ k+ + +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk + XP_019168627.1 11 VPPGFRFHPTEEELLHYYLRKKVTSEKIDL-DVIRDVDLNKLEPWDIQEkcKIGSgPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVI 104 69****************************.9***************952444443456************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +s + + +g++ktLvfykgrap+g+k+dW+mheyrl XP_019168627.1 105 YS-NCKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 139 **.8889***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 378 aa Download sequence |
MNLSVNGQSQ VPPGFRFHPT EEELLHYYLR KKVTSEKIDL DVIRDVDLNK LEPWDIQEKC 60 KIGSGPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYSNCKR IGMRKTLVFY 120 KGRAPHGQKS DWIMHEYRLD DNSPETTVQG TSLVGELSSA PEEGWVVCRV FKKKNYHKAL 180 ESPHSSLVQT HPGNDGVLDQ ILTYMGRSSS SSKQQNGAKN GNNIIINGDD TMQFSHAIQA 240 ARFLHLPPLE TQSAMEILSP HHLPNHAFED LLAETEPSCN NTEPADDMKT AAGPADWVAL 300 DRLVASQLNG QVETSKSYVA DDLSDGLYFP IVDHHRPFGR PNNHHHNSQV NAGGNDVEFW 360 SYTNSSSSPS DPLSHLSV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G46770.1 | 1e-108 | NAC family protein |