PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019167775.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | C2H2 | ||||||||
Protein Properties | Length: 256aa MW: 28304.8 Da PI: 8.1086 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.9 | 0.00071 | 100 | 122 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H XP_019167775.1 100 YECKTCNRVFPSFQALGGHRASH 122 99**********99999998887 PP | |||||||
2 | zf-C2H2 | 14 | 0.00015 | 174 | 196 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H XP_019167775.1 174 HECSICGAEFSSGQALGGHMRRH 196 78********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MEGFEVGKRD ESICPMKKRR TKRPRHHDTS SSLSSFSDNS GGFDHRRSLS NDSDIELNHH 60 RVEEEEDMAK CLMLLSQGHI RKPPPSAAAA AAAGMNREVY ECKTCNRVFP SFQALGGHRA 120 SHRKPKAAAA EQQQQNQESV VVDDDVTTLS LQIPGRPPAV TSSPPRNKVS NRIHECSICG 180 AEFSSGQALG GHMRRHRPLP SIAAADQEIK KPSLRLALDL NLPAPEDDHR EITKFPFASK 240 EQVIVFSASP LVDCHY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 16 | 23 | MKKRRTKR |
2 | 17 | 22 | KKRRTK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03510.1 | 2e-47 | C2H2 family protein |