PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019167193.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 294aa MW: 33498.1 Da PI: 4.8711 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 56 | 6.8e-18 | 78 | 131 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++ ++q++ Le+ Fe ++++ e++ +LA+klgL rqV +WFqNrRa+ + XP_019167193.1 78 KKRRLLPDQVQFLEKSFEVENKLEPERKLHLAQKLGLHPRQVAIWFQNRRARNR 131 4557889*********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 122.3 | 2.3e-39 | 77 | 168 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl +qv++LE+sFe e+kLeperK +la++Lgl+prqva+WFqnrRAR +tkq+Ek++++Lk++yd+l+++ ++++ke+++Lr++++ XP_019167193.1 77 EKKRRLLPDQVQFLEKSFEVENKLEPERKLHLAQKLGLHPRQVAIWFQNRRARNRTKQIEKEFDSLKASYDKLTSDFDAISKENQNLRHQVQ 168 69**************************************************************************************9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence |
MEVGDLRTSI LQTDKFPPSS DVLDSLWIPD SKPSFHGPAA SMVNFDGLQE ARGLEKEESR 60 SNNEDDYQGG YLGHQPEKKR RLLPDQVQFL EKSFEVENKL EPERKLHLAQ KLGLHPRQVA 120 IWFQNRRARN RTKQIEKEFD SLKASYDKLT SDFDAISKEN QNLRHQVQLL TEKLKSKERE 180 DDQMNSFEAE PQKQQPIGGT ILADGKALLS ITVCKQEDAI SSAKSDVLDS DSPHCKDLES 240 SDFSQDEDDS LPPNLFHTLS FPKLEDHHYA INSCNLGFSI SDHSPWFWTS GLVD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 3e-44 | HD-ZIP family protein |