PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019166455.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 282aa MW: 32035.6 Da PI: 8.4328

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019166455.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.5	6.5e-54	10	135	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL++++++ ++++ ++i+evdiyk++Pw+Lp+k++ +ekewyfF++rd+ky++g r+nra+ sgyWkatg+dk+++s XP_019166455.1 10 LPPGFRFHPTDEELIMYYLRNQATSMPCPV-SIIPEVDIYKFDPWELPEKAEFGEKEWYFFTPRDRKYPNGVRPNRAAVSGYWKATGTDKAIYS- 102 79**************************.89***********99999*************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ vg+kk Lvfykgr pkg ktdW+mheyrl XP_019166455.1 103 GSKYVGVKKALVFYKGRPPKGIKTDWIMHEYRL 135 999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MMGGKQTSDL PPGFRFHPTD EELIMYYLRN QATSMPCPVS IIPEVDIYKF DPWELPEKAE 60 FGEKEWYFFT PRDRKYPNGV RPNRAAVSGY WKATGTDKAI YSGSKYVGVK KALVFYKGRP 120 PKGIKTDWIM HEYRLSESRS LPARQNGSMR LDDWVLCRIY KKKNLGKANS NTGMMMMMKT 180 EVEETNPEIA SCSEGGPQVQ GMKLPRACSL THLLEMDCFG SISQLLGDNN NNPATFDNQN 240 PTLMTNNNGI VPFGLGEVVP HQYTQNSIFN QPIFVNPAFQ FQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	1e-114	NAC family protein