PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019166326.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 351aa MW: 40186.6 Da PI: 4.8109 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 32.4 | 1.6e-10 | 21 | 87 | 21 | 90 |
HH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS B3 21 kfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 +f+e+ + +++++ l+++ ++W +++ +k +g++++++GW++ vk+n + +gD ++F ++++ + f XP_019166326.1 21 SFMESVRRD--SKMKVLLRNQVMKVWMIEI--SKIGGAMFFENGWEKVVKDNCVTDGDQLLFIYKEDcDVF 87 678777655..6789***************..*******************************99875655 PP | |||||||
2 | B3 | 34.6 | 3.3e-11 | 249 | 319 | 10 | 83 |
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 + ++g l++pk+ ++++++k + t+tl+d +gr+W+ ++++ + r++l++GW+ ++ n + e D ++ + XP_019166326.1 249 TKRRGDLYVPKEVVRDYNLK--LPPTVTLRDIKGREWTSIVKVWADG-RTWLSGGWRPLCRRNLIGEEDQCICE 319 567899***********888..7779***************999986.779******************99876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 351 aa Download sequence |
MLEKDDSRKR STFGSLKEIP SFMESVRRDS KMKVLLRNQV MKVWMIEISK IGGAMFFENG 60 WEKVVKDNCV TDGDQLLFIY KEDCDVFDFI VIDSFGCEKI GVEGEHAQVV ECIRKGSGGE 120 SRDVFVLKAD IYSRVKKNIK KEVDMDMDID IGISVKKNVK KEKDAVMDAN AREEENDDGH 180 HRAIVSQDMD ATEEDDDDDD DDGHTLPQEK KIGSSGSKRG IPEHYGADLF LSGRYIQPDN 240 AYFVTRIRTK RRGDLYVPKE VVRDYNLKLP PTVTLRDIKG REWTSIVKVW ADGRTWLSGG 300 WRPLCRRNLI GEEDQCICEF LPPQLGNQDN MVLQITVVKE DATLVRNDED M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G66980.1 | 6e-11 | B3 family protein |