PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019166153.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Protein Properties

Length: 432aa MW: 48152.5 Da PI: 5.1261

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019166153.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	46	9.7e-15	110	198	1	97
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k l++s+v + +l lp +f++ h ++ + t+ le + +++e k+i ++++ l++GW++F a++L+egD vF+l+++ +f +v XP_019166153.1 110 FIKFLSRSHVKQGFWLALPADFCRMHL-PP-HDHTIPLEGDNEKQYEAKFIAERQG----LSGGWRGFSLAHNLQEGDAAVFHLVQQYKF--KVY 196 89*******************9994.33.4569***********655555....9*********************997666..555 PP EE CS B3 96 vf 97 + XP_019166153.1 197 TV 198 44 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MAGVSVVPTM ASEPVSMIEH NSEEPLIKQV KPEKNLEQEE GIDDQLTLSQ YFMNKSSSSV 60 SPSMGTPLNG EASASNRKRA RVIKSAALSS PTMQKAKALQ ASLDPTQPSF IKFLSRSHVK 120 QGFWLALPAD FCRMHLPPHD HTIPLEGDNE KQYEAKFIAE RQGLSGGWRG FSLAHNLQEG 180 DAAVFHLVQQ YKFKVYTVRA NNSDHMHERP YLEENCQNDG QPETNYELGD EGFIFENDKK 240 GSPAETIVGS STGSFVDLKN FSIVVNGCPV DSKFSISARV KYYELCCAQK SYLHDGFAEN 300 INYTLAVGII LETVSIADNI KACTLSTPLA DFKSWDSTLS GFKQLGMDVG FLQERLSKLS 360 TRAIEFQGSH EASRLCEIIT EENNLNKEIE SVEKKLMELK EAMMDVQVEK EALETQFLIC 420 NMIFCGMAKS PW

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MAGVSVVPTM ASEPVSMIEH NSEEPLIKQV KPEKNLEQEE GIDDQLTLSQ YFMNKSSSSV  60
SPSMGTPLNG EASASNRKRA RVIKSAALSS PTMQKAKALQ ASLDPTQPSF IKFLSRSHVK  120
QGFWLALPAD FCRMHLPPHD HTIPLEGDNE KQYEAKFIAE RQGLSGGWRG FSLAHNLQEG  180
DAAVFHLVQQ YKFKVYTVRA NNSDHMHERP YLEENCQNDG QPETNYELGD EGFIFENDKK  240
GSPAETIVGS STGSFVDLKN FSIVVNGCPV DSKFSISARV KYYELCCAQK SYLHDGFAEN  300
INYTLAVGII LETVSIADNI KACTLSTPLA DFKSWDSTLS GFKQLGMDVG FLQERLSKLS  360
TRAIEFQGSH EASRLCEIIT EENNLNKEIE SVEKKLMELK EAMMDVQVEK EALETQFLIC  420
NMIFCGMAKS PW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	5e-33	B3 family protein