PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019165863.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | FAR1 | ||||||||
Protein Properties | Length: 252aa MW: 28623.9 Da PI: 6.8669 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 87.4 | 2.1e-27 | 88 | 175 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGF +r+sk ++s+++g+ + r +vC+keg+r ++++ k r+raetr+gC+a++ v+k ++gkw+vtk ++eH+H+l+p XP_019165863.1 88 FYNAYATRVGFIIRVSKLSRSRKDGTAIGRALVCNKEGFRMADRRE--KVVRQRAETRVGCRAMILVRKVSSGKWVVTKSVKEHTHPLTP 175 ******************************************9988..999************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MDFEIDGDLN GEVVGSSVIE VRADAENAIE GGSPDEHDFH QAPNVKVDHD LSGRDVVSIE 60 EPETVSNSAP DEPYVGQEFE SEAAAHAFYN AYATRVGFII RVSKLSRSRK DGTAIGRALV 120 CNKEGFRMAD RREKVVRQRA ETRVGCRAMI LVRKVSSGKW VVTKSVKEHT HPLTPGKGRR 180 ESIYDQFPNE HDKIRELSQQ LAAEKKRSAT YKRHLEMIFE HIEEHNQSLS KKIQDIVNNV 240 REMESRDQQN RR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 2e-94 | FAR1 family protein |