PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019165436.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 303aa MW: 34041.2 Da PI: 9.7182 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 323.5 | 6.2e-99 | 1 | 303 | 1 | 301 |
GAGA_bind 1 mdddgsrernkg.yye.pa.aslkenlglqlmss...iaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllven 89 mdd ++ r++ y+ + +++k +++ lm + aerda+i+er+ al+ekkaa+ erd+ +qrd+a+aer++al erdn+++al+++en XP_019165436.1 1 MDDGQENRRQRMdCYRgGHpQQMK-EQNAFLMNMkmlFAERDAAIEERDRALAEKKAAIEERDIVIQQRDAAIAERDNALRERDNAIAALQFQEN 94 777766557777777753346788.44544554311145******************************************************** PP GAGA_bind 90 slasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesad 184 +++ al g++++ tk+ +l +++ ++++ s+ +r+ ++a pi+ ++e+ +++++k+ + ++++ +k ++++k++++s ++ +++ + XP_019165436.1 95 NMSGAL--GYRISGTTKHPSHLTTHRGNNFQSSCN-TRDAPVTDAVPISAVPSEVVKAQQRKQAKISRSNSTKSLDSPRKTKRVS-EDLNRHVTT 185 966555..899999999999888866677776665.5999999******999999998888877766666666666666644443.555555555 PP GAGA_bind 185 erskaekksidl.vlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGyd 278 + skae++ + l ++n++++Dest+P+PvC+CtG+ rqCYkWGnGGWqS+CCtt++S yPLP+ +++r+ RiagrKmS+++f++lL +L++ G+d XP_019165436.1 186 DGSKAEWDAQYLgSINQINFDESTMPTPVCTCTGVARQCYKWGNGGWQSSCCTTSLSEYPLPQLPHKRHGRIAGRKMSGSVFSRLLTRLSSGGHD 280 679*********88********************************************************************************* PP GAGA_bind 279 lsnpvDLkdhWAkHGtnkfvtir 301 ls+p+DLk++WAkHGtn+++ti+ XP_019165436.1 281 LSTPLDLKNYWAKHGTNRYITIK 303 **********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MDDGQENRRQ RMDCYRGGHP QQMKEQNAFL MNMKMLFAER DAAIEERDRA LAEKKAAIEE 60 RDIVIQQRDA AIAERDNALR ERDNAIAALQ FQENNMSGAL GYRISGTTKH PSHLTTHRGN 120 NFQSSCNTRD APVTDAVPIS AVPSEVVKAQ QRKQAKISRS NSTKSLDSPR KTKRVSEDLN 180 RHVTTDGSKA EWDAQYLGSI NQINFDESTM PTPVCTCTGV ARQCYKWGNG GWQSSCCTTS 240 LSEYPLPQLP HKRHGRIAGR KMSGSVFSRL LTRLSSGGHD LSTPLDLKNY WAKHGTNRYI 300 TIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G21240.1 | 3e-98 | BBR-BPC family protein |