PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019165267.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | C2H2 | ||||||||
Protein Properties | Length: 261aa MW: 27866.2 Da PI: 7.0485 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.3 | 0.00052 | 106 | 128 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k F + L H +H XP_019165267.1 106 YKCSVCDKAFASYQALGGHKASH 128 9***********99998888877 PP | |||||||
2 | zf-C2H2 | 14.4 | 0.00011 | 161 | 183 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+ksF++ L H r+H XP_019165267.1 161 HECSICHKSFPTGQALGGHKRRH 183 78*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MALEALKAAA AVAPKMPPPP LGEVDFHSFK KRRSSKRPRT ESPQPSQSEE EYLAMCLVML 60 ARGEEPRRRI VAEEAAGEAE KESEEATPHP PPPSPPKSVQ ETVQEYKCSV CDKAFASYQA 120 LGGHKASHRK YATAAAAEDN HPSTSTSVTA AGALIPSGKP HECSICHKSF PTGQALGGHK 180 RRHYEGKLGG GGSRSGTSSD GAVISSRTPL EFDLNELPPS PELDLRLSID CGQPSQPTTG 240 DHEVESPMPA KKPRLSFPET A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 3e-35 | C2H2 family protein |