PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019165208.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 314aa    MW: 35745.4 Da    PI: 6.3757
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019165208.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM150.11.1e-46111393128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                     pGfrFhPt+eel+++yLk+ v gkkl+  ++i+ ++iy+++PwdLp ++ + +e+ewyfF+ rd+++ +g r+nr+t++g+Wkatg+d++++s  
  XP_019165208.1  11 PGFRFHPTEEELLDFYLKNMVLGKKLRH-NIITCLNIYRYDPWDLPgHANNVGEREWYFFVARDTRHGSGGRPNRTTEKGFWKATGSDRKIFSLs 104
                     9************************999.88***************555566999*************************************976 PP

             NAM  96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        ++ +glkktLvfy+grap+g ktdWvm+eyrl
  XP_019165208.1 105 hpPNRMIGLKKTLVFYQGRAPRGCKTDWVMNEYRL 139
                     666778***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MEESRLEMEL PGFRFHPTEE ELLDFYLKNM VLGKKLRHNI ITCLNIYRYD PWDLPGHANN  60
VGEREWYFFV ARDTRHGSGG RPNRTTEKGF WKATGSDRKI FSLSHPPNRM IGLKKTLVFY  120
QGRAPRGCKT DWVMNEYRLP DALLPPSSSA KNIVLCKIYR KATSIKVLEQ RAAMEDEINN  180
TLVHNASPSF ITIDSDHHHH DLVAQSFLTV TMNNNNKDDD DDDGEYSTGA MLTVDDEKAA  240
AAEGEFSTSS LLLSLQSGEE VKVKPLPTKL ELPKSSTDYW ASHLQDPFWA QLRSPCLLND  300
LIALTPLPPN LHNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.11e-87NAC family protein