PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019163676.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | YABBY | ||||||||
Protein Properties | Length: 153aa MW: 17214.4 Da PI: 6.6191 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 141.2 | 1.2e-43 | 2 | 132 | 29 | 170 |
YABBY 29 tslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvirPPekrq 123 +s++++v vrCG C++llsv+l + + ++ +++e++++e+ s ++++++ sv s+++ e + p +r ekrq XP_019163676.1 2 SSMLNTVVVRCGQCSNLLSVDLGALPHPFPLQDF-------QQQEQHQFEDAMAGSVPFNYNCNMFSVFE---SHDQLLEQSILTP-MRTLEKRQ 85 79****************************9996.......45566667777777777777777776666...4455555554455.89****** PP YABBY 124 rvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 r+Psaynrfikeei+rikasnP+ish+eafsaaaknWahfP h gl XP_019163676.1 86 RAPSAYNRFIKEEIHRIKASNPKISHKEAFSAAAKNWAHFPLTHCGL 132 ********************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence |
MSSMLNTVVV RCGQCSNLLS VDLGALPHPF PLQDFQQQEQ HQFEDAMAGS VPFNYNCNMF 60 SVFESHDQLL EQSILTPMRT LEKRQRAPSA YNRFIKEEIH RIKASNPKIS HKEAFSAAAK 120 NWAHFPLTHC GLNLVGNRQA NVDDAVGDQD ATQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 5e-35 | YABBY family protein |