PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019163559.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 290aa    MW: 32714.8 Da    PI: 5.5321
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019163559.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM61.13.7e-1971403128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkklel.eevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevls 94 
                      Gf F+Ptd+el+ +yL++ v gk+l+  +++++e d+y   eP+++    + +    y+F++ ++k+++g+r  r + ++g+Wk +   +++ +
  XP_019163559.1   7 HGFIFKPTDKELL-QYLEAFVLGKPLKHtSDFFSEEDLYGGkEPSEIF--GSDGPMTRYYFTELKRKSERGSRFLRgVGDRGTWKGQDAGQPIRV 98 
                     69***********.9**********6551566******97549****6..23345588******************8889*****9988888887 PP

             NAM  95 k..kgelvglkktLvfy......kgrapkgektdWvmheyrl 128
                        +++++g kk+L +       kg a + +   W+m+ey+l
  XP_019163559.1  99 GkeTKTVMGFKKSLRYEakksksKGAADERRGEVWLMKEYSL 140
                     54466679********976665556666666788******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MALRSLHGFI FKPTDKELLQ YLEAFVLGKP LKHTSDFFSE EDLYGGKEPS EIFGSDGPMT  60
RYYFTELKRK SERGSRFLRG VGDRGTWKGQ DAGQPIRVGK ETKTVMGFKK SLRYEAKKSK  120
SKGAADERRG EVWLMKEYSL SDDYLRDKNV VLKDVVLCRI KRVFRNTSRS RESSTQNFNE  180
NDTSLEIYNW PENDNVMVSL PPLETSTLAG EVSSGVDAYG GVSAMGSGVD DAAYGASSMV  240
NYPLLDELDE LDELLRKTPP HDIFGDFNLL TSEDNEKIDH PKPIPISRPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.16e-14NAC family protein