PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019163556.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 292aa MW: 32782.1 Da PI: 5.8845 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 59.7 | 9.5e-19 | 7 | 140 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkklel.eevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevls 94 Gf F+Ptd+el+ +yL++ v gk+l+ +++++ d+y + eP+++ +++ y+F++ ++k+++g+r r + ++g+Wk + +++ + XP_019163556.1 7 HGFIFKPTDKELL-QYLEAFVLGKPLKHtSDFFSMEDLYGAkEPSEIF--GSGGLMTRYYFTELRRKSERGSRFLRnVGDRGTWKGQDAGQPIRV 98 69***********.9**********66614568888**98769****6..23455688******************7777*****9888888877 PP NAM 95 k..kgelvglkktLvfy......kgrapkgektdWvmheyrl 128 +++++g kk+L + kg a + + W+m+ey+l XP_019163556.1 99 GkkTKTVMGFKKSLRYEakksksKGGADERRGEVWLMKEYSL 140 53366679********976555545556666788******97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 292 aa Download sequence |
MALRSLHGFI FKPTDKELLQ YLEAFVLGKP LKHTSDFFSM EDLYGAKEPS EIFGSGGLMT 60 RYYFTELRRK SERGSRFLRN VGDRGTWKGQ DAGQPIRVGK KTKTVMGFKK SLRYEAKKSK 120 SKGGADERRG EVWLMKEYSL SDDYLRDKNV VPKDVVLCRI KRVLRNTSRS RELSTQNFNE 180 DDTPLEIYNW PENDNVMVSL PLETSTLAGE VSNGVDAYGG VSASAMGSGV DDAYGGVIAV 240 GNDPLLDELD ELLRKTPPQG IFDDYNIWSD ILAPEDNERI DHPGPVPILK AI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G04410.1 | 2e-15 | NAC family protein |