PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019163554.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 271aa    MW: 30751 Da    PI: 9.1677
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019163554.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.87.8e-1871403128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevls 94 
                      Gf F+Ptd+el+ +yL++ v gk+l+ ++  ++  ++y   eP+++    + +    y+F++ ++k ++g+r  r + ++g+Wk +   +++ +
  XP_019163554.1   7 HGFIFKPTDKELL-QYLEAFVLGKPLKHTSDfFSMEHLYGGkEPSEIF--GSDGPMTRYYFTELKRKCEHGSRFLRtVGDRGTWKGQDAGTPIRV 98 
                     69***********.9**********666444277778876449****6..23345588******************56669****9888888877 PP

             NAM  95 k..kgelvglkktLvfy......kgrapkgektdWvmheyrl 128
                        +++++g kk+L +       kg a + +   W+m+ey+l
  XP_019163554.1  99 GkeTKTVMGFKKSLRYEskksksKGGADERRGEVWLMKEYSL 140
                     54366679********976555445555556778******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MALRSLHGFI FKPTDKELLQ YLEAFVLGKP LKHTSDFFSM EHLYGGKEPS EIFGSDGPMT  60
RYYFTELKRK CEHGSRFLRT VGDRGTWKGQ DAGTPIRVGK ETKTVMGFKK SLRYESKKSK  120
SKGGADERRG EVWLMKEYSL SDDYLREKNV VPKDVVLCRI KRVLRNTSRS RELSTQNFNE  180
NDTPLEIYNW PENDNVMVSL PPSETSNLAR EVSSGVDAYR EVSAMGSGVD DPLLDELDEL  240
LRKTPPHGKG LVKHMTQTFV LLASALQIYG G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.13e-13NAC family protein