PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019163552.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 291aa    MW: 32986.2 Da    PI: 6.0054
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019163552.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM58.71.9e-1871403128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkk.leleevikevdiyk.vePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevls 94 
                      Gf F+Ptd+el+ +yL++ v gk+  +++++++  ++y   eP+++    + +    y+F++ ++k ++g+r  r + ++g+Wk + + k++++
  XP_019163552.1   7 HGFIFKPTDKELL-QYLEAFVLGKPlKHTFDFFAVEHLYGgKEPSEIF--GSDGPMTRYYFTELKRKCEHGSRFLRtVGDRGTWKGQDRGKPIKV 98 
                     69***********.9**********534456677777775269****6..23345588******************56669****9988888887 PP

             NAM  95 k..kgelvglkktLvfy......kgrapkgektdWvmheyrl 128
                        k++++g kk+L +       kg a + +   W+m+ey+l
  XP_019163552.1  99 GdeKKTVMGFKKSLRYEakksksKGGADERRGEVWLMKEYSL 140
                     64477779********976555545556666788******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MALRSLHGFI FKPTDKELLQ YLEAFVLGKP LKHTFDFFAV EHLYGGKEPS EIFGSDGPMT  60
RYYFTELKRK CEHGSRFLRT VGDRGTWKGQ DRGKPIKVGD EKKTVMGFKK SLRYEAKKSK  120
SKGGADERRG EVWLMKEYSL SDDYLRDKNV VPKDVVLCRI KRVLRNTSRS RELSTQNFNE  180
NNTPLEIYNW PENDNVMVSL PPSETSNLAR EDFNGVDAYG GVSAMGSGVD DANGGMSAMG  240
NDLLLDELDE LLRKTPPHDI VDDDNFWCDI LAPENNERID HPGPVPIGPF N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-14NAC family protein