PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019163551.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 292aa MW: 33189.4 Da PI: 6.2729 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 56.5 | 9.4e-18 | 7 | 141 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkklel.eevikevdiyk.vePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevls 94 Gf F+Ptd+el+ +yL++ v gk+l+ +++++ ++y eP+++ + + y+F++ ++k ++g+r r + ++g+Wk + +++ + XP_019163551.1 7 HGFIFKPTDKELL-QYLEAYVLGKPLKHtSDFFALEHLYGgKEPSEIF-G-SDSPMTRYYFTELKRKCEHGSRFLRtVGDRGTWKGQDAGQPIRV 98 69***********.9**********666145577667775269****6.2.2334578******************56669****9988888887 PP NAM 95 k..kgelvglkktLvfy.......kgrapkgektdWvmheyrl 128 +++++g kk+L + g a + + W+m+ey+l XP_019163551.1 99 GkeTKTVMGFKKSLRYEakkskskGGGADERRGEVWLMKEYSL 141 54466679********9654444223444445678******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MALRSLHGFI FKPTDKELLQ YLEAYVLGKP LKHTSDFFAL EHLYGGKEPS EIFGSDSPMT 60 RYYFTELKRK CEHGSRFLRT VGDRGTWKGQ DAGQPIRVGK ETKTVMGFKK SLRYEAKKSK 120 SKGGGADERR GEVWLMKEYS LSDDYLRDKK VVRKDVVLCR IKRVLRNTSR SRELSTQNFN 180 ENDTPLEIYN WPKNDNVMVS LPPSETSNLA REDFNGVDAY GGVNAMGSGV DDAYPEVSAM 240 GNDLLLDELD ELLRKTPPHD IVDDDNFWSD ILAPDNNERM DHPGPVPIGP FN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 1e-08 | NAC family protein |