PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019161645.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 201aa    MW: 23993.4 Da    PI: 6.5328
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019161645.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM68.32.1e-21181403128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     +G  F Pt++el++ +Lkkk+e+++l+  e+ike+  +y++ P+ Lp  k+k  +++e y+F+++ kk ++g+    +  +g Wk+ g +++ + 
  XP_019161645.1  18 RGQYFIPTESELINGFLKKKIERRPLPN-EIIKEIpFLYEYPPELLPiGKFKYaRNNEAYYFTHKGKKPPNGEFLGGKKFDGEWKTEGLEEACFG 111
                     5899**********************99.89****779999999999744444267799*************998888889*************9 PP

             NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +++  g k+ L +y  r +  ++t Wv++eyr 
  XP_019161645.1 112 -QNQILGFKRKLYLY--RCE--KRTGWVIKEYRY 140
                     .9999**********..344..4899******96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MDELEVYEHL YEPGMGRRGQ YFIPTESELI NGFLKKKIER RPLPNEIIKE IPFLYEYPPE  60
LLPIGKFKYA RNNEAYYFTH KGKKPPNGEF LGGKKFDGEW KTEGLEEACF GQNQILGFKR  120
KLYLYRCEKR TGWVIKEYRY NPKRVPDHYL QNSVFHDFLL NYVVLKIKFN PDLRENFTAE  180
ESFSISMEDA KDLDVFQDFE G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36160.14e-15NAC family protein