PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019161643.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 203aa    MW: 24148.6 Da    PI: 7.6361
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019161643.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM65.51.5e-20181413128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLp.kkvka.eekewyfFskrdkkya.tgkrknratksgyWkatgkdkevl 93 
                     +G  F Pt++el++ +Lkkk+e+++l+  e+ike+  +y++ P+ Lp  k+k  +++e y+F+++ k ++ +g+    +  +g Wk+ g +++ +
  XP_019161643.1  18 RGQYFIPTESELINGFLKKKIERRPLPN-EIIKEIpFLYEYPPELLPiGKFKYaRNNEAYYFTHKGKIKPpNGEFLGGKKFDGEWKTEGVKEACF 111
                     5899**********************99.89****77999999999974444426779999999999877355555557779************9 PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +++  g k+ L +y  r++k  +t Wv++eyr 
  XP_019161643.1 112 G-QNQILGFKRKLYLY--RSEK--RTGWVVKEYRY 141
                     9.9999**********..4444..89*******96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MDELEVYEHL YEPGMGRRGQ YFIPTESELI NGFLKKKIER RPLPNEIIKE IPFLYEYPPE  60
LLPIGKFKYA RNNEAYYFTH KGKIKPPNGE FLGGKKFDGE WKTEGVKEAC FGQNQILGFK  120
RKLYLYRSEK RTGWVVKEYR YNPKRVPDHY LQNSVFHDFL LNYVVLKIKF NPDLRENFTA  180
EESSFSISME DAKDLDVFQD FEG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36160.13e-13NAC family protein